CESSHIV-1 database

General information on HIV-1 isolate

# 3232

Accession number	AY456319
Name	SNS59
Subtype	C
Country	Angola
Sampling year	2001
Patient	SNS59

AY456319 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgaggg -cgggggctgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy