General information on HIV-1 isolate
# 85
| Accession number |
AF259954 |
| Name | pCM235-2 |
| Subtype | CRF01_AE |
| Country | Thailand |
| Sampling year |
1990 |
| Patient | CM235 |
AF259954 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .
The region encompassing PBS domainThe primary sequence:
tgtgttggga ctctggtaac tagagatccc tcagaccact ctagactgag t--aaaatctct agcagtggcg cccgaacagg gacttgaaag cgaaagttaa tagggactcg aaagcgaaag tt---ccagagaa gttctctcga cgcaggac
Isolates with identical sequences of region:
AF259955(#86)
The optimal secondary structure:
The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy
