CESSHIV-1 database

General information on HIV-1 isolate

# 375

Accession number	AY322185
Name	ML013-2-1997
Subtype	A1
Country	Kenya
Sampling year	1997
Patient	013

AY322185 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtttga ctctggtaac tagagatccc tcagaccact ctagacggtg ta-aaaatctc tagcagtggc gcccgaacag ggactcgaaa gcgaaagtt---c cagagaagtt ctctcgacgc aggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy