CESSHIV-1 database

General information on HIV-1 isolate

# 69

Accession number	AF107771
Name	UGSE8131
Subtype	A1
Country	Sweden (Uganda)
Sampling year	1995
Patient	SE8131

AF107771 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaggt gcacacagca agaggcgaga g-cggcgactg gtgagtacgc catt--ttttga ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy