CESSHIV-1 database

General information on HIV-1 isolate

# 138

Accession number	AF110972
Name	C-96BW12.10
Subtype	C
Country	Botswana
Sampling year	1996
Patient	96BW12

AF110972 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgaggg a-ggcgactgg tgagtacgcc aattttattt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy