CESSHIV-1 database

General information on HIV-1 isolate

# 179

Accession number	AF443081
Name	98BWMO36.a5
Subtype	C
Country	Botswana
Sampling year	1998
Patient	MO36A5

AF443081 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctggaagt gcactcggca agaggcgagg gg-ggcggctg gtgagtacgc caattttatt tgactagcgg tggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy