CESSHIV-1 database

General information on HIV-1 isolate

# 182

Accession number	AF443084
Name	99BW4642.4
Subtype	C
Country	Botswana
Sampling year	1999
Patient	46424

AF443084 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggatcggct tgctgaaagt gcactcggca agaggcgaga g-cggcggctg gtgagtacgc caaaatttta tttgactagc ggaggctaga aggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy