CESSHIV-1 database

General information on HIV-1 isolate

# 190

Accession number	AF443092
Name	00BW1616.2
Subtype	C
Country	Botswana
Sampling year	2000
Patient	16162

AF443092 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactccggca agaggcgaga g-cggcgactg gtgagtacgc caaattttat ttgactagcg gaggctagaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy