CESSHIV-1 database

General information on HIV-1 isolate

# 191

Accession number	AF443093
Name	00BW1686.8
Subtype	C
Country	Botswana
Sampling year	2000
Patient	1686

AF443093 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag gagcggcggc tggtgagtac gccaaacttt aatttgacta gcggaggcta gaaggagaga 

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy