CESSHIV-1 database

General information on HIV-1 isolate

# 192

Accession number	AF443094
Name	00BW1759.3
Subtype	C
Country	Botswana
Sampling year	2000
Patient	17593

AF443094 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag cggcggactg gtgagtacgc caatttttat ttgactagcg gaggctagaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy