CESSHIV-1 database

General information on HIV-1 isolate

# 1990

Accession number	AY118157
Name	93ZM74
Subtype	C
Country	Zambia
Sampling year	1993
Patient	93ZM74

AY118157 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgaggg g-ggcgactgg tgagtacgc-a aattttttaa ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy