CESSHIV-1 database

General information on HIV-1 isolate

# 306

Accession number	AY169813
Name	97CMABB447
Subtype	Group O
Country	Cameroon
Sampling year	1997
Patient	447

AY169813 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggctcggct tagcggagtg cacctgctaa gaggcgag-----ag gaactcacag agggtgagta aatt-g-ctggc ggtggccaga cctaggggaa ggacgaagtc tctaggggag gaa

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy