CESSHIV-1 database

General information on HIV-1 isolate

# 245

Accession number	AY173952
Name	US1
Subtype	B
Country	USA
Sampling year	1990
Patient	US1

AY173952 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgc--ggcaaga ggcgaggggc ggcgactggt gagtacgcca aaaattttga ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy