CESSHIV-1 database

General information on HIV-1 isolate

# 3228

Accession number	AY456315
Name	HDP75
Subtype	A1
Country	Angola
Sampling year	2001
Patient	HDP75

AY456315 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgagagt gcacacggca agaggcgaga g-cggcgactg gtgagtacgc caaa--ttttga ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy