CESSHIV-1 database

General information on HIV-1 isolate

# 3240

Accession number	AY456320
Name	SNS55
Subtype	C
Country	Angola
Sampling year	2001
Patient	SNS55

AY456320 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag cagcggcgac tggtgagtac gccgaatttt gttttgacta gcggaggcta gaaggagaga 

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy