CESSHIV-1 database

General information on HIV-1 isolate

# 3202

Accession number	AY456329
Name	HDC228
Subtype	F1
Country	Angola
Sampling year	2001
Patient	HDC228

AY456329 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacagcaa gaggcgagag ggagcgggga ctggtgagta cgccgat--ttt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy