CESSHIV-1 database

General information on HIV-1 isolate

# 3546

Accession number	AY508155
Name	8_G11
Subtype	B
Country	USA
Submitted to NCBI	2003

AY508155 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgagag gcggcgactg gtgagtacgc caaaaatttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy