CESSHIV-1 database

General information on HIV-1 isolate

# 3550

Accession number	AY624561
Name	ARE195
Subtype	BC
Country	Argentina
Sampling year	2001
Patient	PA-33

AY624561 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gaactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcggctgg tgagtacgcc atttttattt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy