CESSHIV-1 database

General information on HIV-1 isolate

# 430

Accession number	AY901967
Name	03ZASK058B2
Subtype	C
Country	South Africa
Sampling year	2003
Patient	SK-058

AY901967 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcag gaggcgaggg g-ggcgactgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy