CESSHIV-1 database

General information on HIV-1 isolate

# 579

Accession number	DQ085875
Name	BREPM13853
Subtype	BF1
Country	Brazil
Sampling year	2000
Patient	13853

DQ085875 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacggcaa gaggcgaggg gcagcgaacg gtgagtacgc tgaaaatttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy