CESSHIV-1 database

General information on HIV-1 isolate

# 740

Accession number	DQ358799
Name	01BR042
Subtype	BF1
Country	Brazil
Sampling year	2001
Patient	BR042

DQ358799 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacggcaa gaggcgagag gagcggcgac tggtgagtac gccaaa--tttt gactagcaga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy