CESSHIV-1 database

General information on HIV-1 isolate

# 680

Accession number	DQ445633
Name	03ZAPS032MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	032MB

DQ445633 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcgactgg tgagtacgcc gaattttatt ttgactagcg gaggctagaa ggagaga

Isolates with identical sequences of region:

AY456321(#3260)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy