CESSHIV-1 database

General information on HIV-1 isolate

# 1449

Accession number	EF178305
Name	MS2004_37_007
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (8012030)

EF178305 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY857129(#1450) EF370180(#1454) EU047612(#1815)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy