CESSHIV-1 database

General information on HIV-1 isolate

# 1681

Accession number	EF178358
Name	MS2004_37_060
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (3350218)

EF178358 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaagc gcgctcggca agaggcgagg ggcggcgact ggtgagtacg ccaaaaattg tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY857029(#1627)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy