CESSHIV-1 database

General information on HIV-1 isolate

# 1685

Accession number	EF178372
Name	MS2004_37_074
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (5274861)

EF178372 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtragtacgc caaaaaattt ttactagcgg aggctataaa gagaga

Isolates with identical sequences of region:

AY857068(#1638)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy