CESSHIV-1 database

General information on HIV-1 isolate

# 1690

Accession number	EF178396
Name	MS2004_37_098
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (8130991)

EF178396 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgckgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaaatttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY857133(#1651)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy