CESSHIV-1 database

General information on HIV-1 isolate

# 1692

Accession number	EF178398
Name	MS2004_37_100
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (6180994)

EF178398 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaawatttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AY857089(#1642)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy