CESSHIV-1 database

General information on HIV-1 isolate

# 1696

Accession number	EF178404
Name	MS2004_37_106
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (6750676)

EF178404 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaa--ttttga ctagcagagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy