CESSHIV-1 database

General information on HIV-1 isolate

# 1704

Accession number	EF178418
Name	MS2004_37_120
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (8820638)

EF178418 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaacttttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY857153(#1655) EF370281(#1742)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy