CESSHIV-1 database

General information on HIV-1 isolate

# 1705

Accession number	EF178420
Name	MS2004_37_122
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (4756961)

EF178420 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaatttt tttgactagc agaggctaga aggagaga

Isolates with identical sequences of region:

AY857053(#1634)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy