CESSHIV-1 database

General information on HIV-1 isolate

# 1746

Accession number	EF370295
Name	01HSJ12_2901
Subtype	B
Country	South Korea
Sampling year	2001
Patient	HSJ

EF370295 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggattcggct tgttgaagcg cgcacgccaa gaggcgaggg gcggcgaacg gtgagtacgc caaaa-ttttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy