CESSHIV-1 database

General information on HIV-1 isolate

# 3259

Accession number	EF374119
Name	1
Subtype	CRF02_AG
Country	Nigeria
Submitted to NCBI	2007
Patient	Pat-1

EF374119 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacrcagcaa gaggcgagag gcggcgactg gtgagtacgc caa---ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy