CESSHIV-1 database

General information on HIV-1 isolate

# 1020

Accession number	EF514710
Name	CTL 035
Subtype	B
Country	Denmark
Sampling year	2001
Patient	CTL-035

EF514710 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgacga ctggtgagta cgccaat--ttt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy