CESSHIV-1 database

General information on HIV-1 isolate

# 992

Accession number	EF637054
Name	BREPM1027
Subtype	B
Country	Brazil
Sampling year	2003
Patient	1027

EF637054 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaacg gtgagtacgc caa---ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy