CESSHIV-1 database

General information on HIV-1 isolate

# 1806

Accession number	EF694034
Name	VB49 clone 1
Subtype	C
Country	India
Submitted to NCBI	2007
Patient	VB49

EF694034 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag a-ggcgactgg tgagtacgcc taattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

EF694036(#1808)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy