CESSHIV-1 database

General information on HIV-1 isolate

# 3332

Accession number	EU547186
Name	SAMI4303
Subtype	B
Country	USA
Sampling year	2004
Patient	SAMI_WGA1

EU547186 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaccg gtgagtacgc catt--ttttga ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy