CESSHIV-1 database

General information on HIV-1 isolate

# 1189

Accession number	EU786676
Name	ES X1998 (B)
Subtype	B
Country	Spain
Sampling year	2006
Patient	1998

EU786676 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc caa---ttttgac tagcggaggc tagaaggaga ga

Isolates with identical sequences of region:

AY161890(#3220)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy