CESSHIV-1 database

General information on HIV-1 isolate

# 1198

Accession number	FJ195086
Name	BREPM1070
Subtype	B
Country	Brazil
Sampling year	2004

FJ195086 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactgggct tctggaagcg cccccgccaa gagggagggg ggggggattg gtgagtcccc caaaaatttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy