CESSHIV-1 database

General information on HIV-1 isolate

# 1110

Accession number	FJ213782
Name	UY04_4022
Subtype	CRF38_BF1
Country	Uruguay
Sampling year	2004
Patient	4022

FJ213782 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgagag -cggcgactgg tgagtacgcc aat--ttttgac tagcagaggc taaaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy