CESSHIV-1 database

General information on HIV-1 isolate

# 1537

Accession number	FJ495818
Name	CH40E_flA1
Subtype	B
Country	USA
Sampling year	2006
Patient	700010040

FJ495818 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaa-tattg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy