CESSHIV-1 database

General information on HIV-1 isolate

# 2656

Accession number	FJ496201
Name	ZM247F_flE11
Subtype	C
Country	Zambia
Sampling year	2003
Patient	ZM247F

FJ496201 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacgcagcaa gaggcgagag -cggcggctgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

FJ496198(#2653) FJ496205(#2660)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy