CESSHIV-1 database

General information on HIV-1 isolate

# 3353

Accession number	FJ614907
Name	04LKD7_4079
Subtype	CRF02_AG
Country	South Korea (Ghana)
Sampling year	2004
Patient	LKD

FJ614907 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggactcggc ttgctgaggt gcacacagca agaggcgaga g-cggcgactg gtgagtacgc caaa--ttttga ctagcggagg ctataaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy