CESSHIV-1 database

General information on HIV-1 isolate

# 3358

Accession number	FJ614991
Name	00NYR1_4199
Subtype	CRF02_AG
Country	South Korea
Sampling year	2000
Patient	NYR

FJ614991 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aat--ttttgac tagcagaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy