CESSHIV-1 database

General information on HIV-1 isolate

# 3249

Accession number	FJ853620
Name	P2021-3
Subtype	B
Country	Spain
Sampling year	2008
Patient	P2021

FJ853620 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaatttt ttgactagcg gaggctagaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy