CESSHIV-1 database

General information on HIV-1 isolate

# 3254

Accession number	GQ372990
Name	ES X2556_3
Subtype	B
Country	Spain
Sampling year	2008
Patient	X2556

GQ372990 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caat--ttttga ctagcggagg ctagaaggag aga

Isolates with identical sequences of region:

EF370306(#1754)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy