CESSHIV-1 database

General information on HIV-1 isolate

# 3408

Accession number	GQ429844
Name	clone_28
Subtype	A1
Country	Kenya
Sampling year	1995
Patient	1(35465)

GQ429844 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggcg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aat--ttttgac tagcagaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy