CESSHIV-1 database

General information on HIV-1 isolate

# 2795

Accession number	EU170153
Name	luBF_16_05
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2005

EU170153 isolate has foldings of [PBS region] [123nt 3' terminus] .

The region encompassing 123 nt 3' terminus

The primary sequence:

cactgcttaa gcctcaataa agcttgcctt gagtgcttca agtagtgtgt gcccgtctgt tgtgtgactc tggtaactag agatccctca gaccacttta gtccgtgtgg aaaatctcta gca

Isolates with identical sequences of region:

EU170139(#2973)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy