CESSHIV-1 database

General information on HIV-1 isolate

# 1053

Accession number	EU735539
Name	05BRRJ200
Subtype	CRF40_BF
Country	Brazil
Sampling year	2005

EU735539 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing 123 nt 3' terminus

The primary sequence:

cactgcttaa gcctcaataa agcttgcctt gagtgcttta agtagtgtgt gcccgtctgt tgtgtgactc tggtaactag agatccctca gacccattta gtcagtgtgg aaaatctcta gca

Isolates with identical sequences of region:

EF370274(#1741) EF370275(#2249)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy