CESSHIV-1 database

General information on HIV-1 isolate

# 256

Accession number	U69586
Name	WCIPR clone 46
Subtype	B
Country	USA
Sampling year	1985
Patient	WC1-001

U69586 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing 123 nt 3' terminus

The primary sequence:

cactgcttaa gcctcaataa agcttgcctt gagtgcttca agtagtgtgt gcccgtctgt tgtgtgactc tggtaactag agatccctca gaccctttta gtcagtgtga aaaatctcta gca

Isolates with identical sequences of region:

AF256210(#1073) U69587(#257) U69588(#258)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy