CESSHIV-1 database

General information on HIV-1 isolate

# 398

Accession number	AY455781
Name	94BR-RJ-41
Subtype	BF1
Country	Brazil
Sampling year	1994
Patient	BR41

AY455781 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtccgtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagta gaaccagaga agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy